Literature mining discerns latent disease-gene relationships.

Priyadarshini RaiAtishay JainShivani KumarDivya SharmaNeha JhaSmriti ChawlaAbhijit RajApoorva GuptaSarita PooniaAngshul MajumdarTanmoy ChakrabortyGaurav Ahuja Debarka Sengupta

Published in: Bioinformatics (Oxford, England) (2024)

PathoBERT pretrained model: https://github.com/Priyadarshini-Rai/Pathomap-Model. BioSentVec-based abstract classification model: https://github.com/Priyadarshini-Rai/Pathomap-Model. Pathomap R package: https://github.com/Priyadarshini-Rai/Pathomap.

Keyphrases

systematic review
deep learning
gene expression
transcription factor