Combined pangenomics and transcriptomics reveals core and redundant virulence processes in a rapidly evolving fungal plant pathogen.
Hongxin ChenRobert KingDan SmithCarlos BayonTom AshfieldStefano TorrianiKostya KanyukaKim Hammond-KosackStephane BieriJason J RuddPublished in: BMC biology (2023)
These data support the combined use of pangenomics and transcriptomics for defining genes which represent core, and potentially exploitable, weaknesses in rapidly evolving pathogens.
Keyphrases
- single cell
- antimicrobial resistance
- escherichia coli
- pseudomonas aeruginosa
- staphylococcus aureus
- genome wide
- electronic health record
- biofilm formation
- gram negative
- candida albicans
- gene expression
- machine learning
- multidrug resistant
- bioinformatics analysis
- data analysis
- genome wide identification
- genome wide analysis