Endophytic fungus Pseudofusicoccum stromaticum produces cyclopeptides and plant-related bioactive rotenoids.
Aline C M SobreiraFrancisco das Chagas Lima PintoKatharine G D FlorêncioDiego V WilkeCharley C StaatsRodrigo de A S StreitFrancisco das Chagas de O FreireOtília D L PessoaAmaro Emiliano Trindade SilvaKirley Marques CanutoPublished in: RSC advances (2018)
In the present study, we integrated liquid chromatography high-resolution mass spectrometry (LC-HRMS) and high-throughput DNA sequencing for prospecting cytotoxic specialized metabolites from Pseudofusicoccum stromaticum , an endophytic fungus associated to the medicinal plant Myracrodruon urundeuva . LC-HRMS profiling allowed identifying putatively eleven compounds in the ethyl acetate extract from P. stromaticum broth. Additionally, a chemical fractionation guided by cytotoxicity combined with spectrometric analysis resulted in the isolation of three compounds: the cyclopeptide cyclo-l-Phe-d-Leu-l-Leu-l-Leu-l-lle along with the known rotenoids rotenolone and tephrosin. MTT assay showed that tephrosin (IC 50 0.51 μg mL -1 ) has strong cytotoxic effect and may be pointed out as the compound responsible for the antiproliferative activity of P. stromaticum . Next Generation Sequencing (NGS) and genome mining of P. stromaticum draft genome revealed 56 contigs codifying specialized metabolites biosynthesis-related enzymes. Nearly half of such genes (44.6%) could be mapped to orphan Biosynthetic Gene Clusters (BGCs) of related plant pathogens belonging to family Botryosphaeriaceae. Also, screening for rotenoids biosynthetic enzymes led to characterization of a putative chalcone isomerase-like (CHI-like) protein. This is the first report of rotenoids biosynthesized by a fungus, unveiling a unique ability of P. stromaticum .
Keyphrases
- high resolution mass spectrometry
- liquid chromatography
- mass spectrometry
- ultra high performance liquid chromatography
- high throughput
- tandem mass spectrometry
- single cell
- simultaneous determination
- genome wide
- gas chromatography
- ms ms
- solid phase extraction
- palliative care
- copy number
- high performance liquid chromatography
- cell wall
- oxidative stress
- ionic liquid
- gene expression
- high resolution
- transcription factor
- genome wide identification
- single molecule