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DNA-encoded probe-based assay for profiling plant kinase activities.

Yuan-Chi ChienC Alexander ValenciaHan Yong LeeGyeong Mee YoonDongwook Kim
Published in: PNAS nexus (2024)
Elucidating kinase-substrate relationships is pivotal for deciphering cellular signaling mechanisms, yet it remains challenging due to the complexity of kinase networks. Herein, we report the development of a versatile DNA-based kinase assay platform for high-throughput profiling of plant protein kinase activities and substrate preferences. Our approach employs DNA-linked peptide substrates, facilitating quantitative and specific kinase activity detection through next-generation DNA sequencing. Leveraging DNA barcodes as quantitative readouts, our approach establishes a high-throughput, sensitive, and specific platform for dissecting kinase-substrate networks in plants, representing a powerful tool for elucidating signaling mechanisms in plants.
Keyphrases
  • high throughput
  • protein kinase
  • circulating tumor
  • single cell
  • cell free
  • single molecule
  • tyrosine kinase
  • nucleic acid
  • living cells
  • decision making
  • amino acid
  • quantum dots