Login / Signup

Comparative Analysis of Mesophilic YqfB-Type Amidohydrolases.

Roberta StatkevičiūtėMikas SadauskasJuta RainytėKarolina KavaliauskaitėRolandas Meškys
Published in: Biomolecules (2022)
The widespread superfamily of the human activating signal cointegrator homology (ASCH) domain was identified almost 20 years ago; however, the amount of experimental data regarding the biological function of the domain is scarce. With this study, we aimed to determine the putative cellular functions of four hypothetical ASCH domain-containing amidohydrolase YqfB analogues by investigating their activity towards various <i>N</i>-acylated cytosine derivatives, including potential nucleoside-derived prodrugs, as well as their ability to bind/degrade nucleic acids in vitro. According to determined kinetic parameters, <i>N</i><sup>4</sup>-acetylcytidine is assumed to be the primary substrate for amidohydrolases. Despite the similarity to the proteins containing the PUA domain, no nucleic acid binding activity was detected for YqfB-like proteins, suggesting that, in vivo, these enzymes are a part of the pyrimidine salvage pathway. We also demonstrate the possibility of the expression of YqfB-type amidohydrolases in both prokaryotic and eukaryotic hosts. The small protein size and remarkable halotolerance of YqfB-type amidohydrolases are of great interest for further fundamental research and biotechnological applications.
Keyphrases
  • nucleic acid
  • binding protein
  • endothelial cells
  • amino acid
  • molecular docking
  • small molecule
  • risk assessment
  • climate change
  • induced pluripotent stem cells
  • dna binding
  • human health
  • molecular dynamics simulations