Accuracy of RNAseq based SNP discovery and genotyping in Populusnigra.

Odile RogierAurélien ChateignerSouhila AmanzougareneMarie-Claude Lesage-DescausesSandrine BalzergueVéronique BrunaudJosé CaiusLudivine Soubigou-TaconnatVéronique JorgeVincent Segura

Published in: BMC genomics (2018)

We demonstrated the potential and accuracy of RNAseq as an efficient way to genotype SNPs in P. nigra. These results open prospects towards the use of this technology for quantitative and population genomics studies.

Keyphrases

genome wide
high throughput
dna methylation
small molecule
minimally invasive
single cell
high resolution
current status
case control
human health
gene expression
high density
climate change