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Robust estimation of the expected survival probabilities from high-dimensional Cox models with biomarker-by-treatment interactions in randomized clinical trials.

Nils TernèsFederico RotoloStefan Michiels
Published in: BMC medical research methodology (2017)
Based on our simulations, we propose a unified framework for: developing a prediction model with biomarker-by-treatment interactions in a high-dimensional setting and validating it in absence of external data; accurately estimating the expected survival probability of future patients with associated confidence intervals; and graphically visualizing the developed prediction model. All the methods are implemented in the R package biospear, publicly available on the CRAN.
Keyphrases
  • molecular dynamics
  • electronic health record
  • combination therapy
  • deep learning