UV-Induced Charge-Transfer States in Short Guanosine-Containing DNA Oligonucleotides.
Corinna L KufnerWolfgang ZinthDominik B BucherPublished in: Chembiochem : a European journal of chemical biology (2020)
Charge transfer has proven to be an important mechanism in DNA photochemistry. In particular, guanine (dG) plays a major role as an electron donor, but the photophysical dynamics of dG-containing charge-transfer states have not been extensively investigated so far. Here, we use UV pump (266 nm) and picosecond IR probe (∼5-7 μm) spectroscopy to study ultrafast dynamics in dG-containing short oligonucleotides as a function of sequence and length. For the pure purine oligomers, we observed lifetimes for the charge-transfer states of the order of several hundreds of picoseconds, regardless of the oligonucleotide length. In contrast, pyrimidine-containing dinucleotides d(GT) and d(GC) show much faster relaxation dynamics in the 10 to 30 ps range. In all studied nucleotides, the charge-transfer states are formed with an efficiency of the order of ∼50 %. These photophysical characteristics will lead to an improved understanding of DNA damage and repair processes.
Keyphrases
- single molecule
- dna damage
- nucleic acid
- circulating tumor
- cell free
- magnetic resonance
- atomic force microscopy
- multidrug resistant
- magnetic resonance imaging
- high resolution
- photodynamic therapy
- high glucose
- dna repair
- computed tomography
- mass spectrometry
- solid state
- endothelial cells
- amino acid
- aqueous solution
- energy transfer
- simultaneous determination