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Enzyme-free nucleic acid dynamical systems.

Niranjan SrinivasJames ParkinGeorg SeeligErik WinfreeDavid Soloveichik
Published in: Science (New York, N.Y.) (2018)
Chemistries exhibiting complex dynamics-from inorganic oscillators to gene regulatory networks-have been long known but either cannot be reprogrammed at will or rely on the sophisticated enzyme chemistry underlying the central dogma. Can simpler molecular mechanisms, designed from scratch, exhibit the same range of behaviors? Abstract chemical reaction networks have been proposed as a programming language for complex dynamics, along with their systematic implementation using short synthetic DNA molecules. We developed this technology for dynamical systems by identifying critical design principles and codifying them into a compiler automating the design process. Using this approach, we built an oscillator containing only DNA components, establishing that Watson-Crick base-pairing interactions alone suffice for complex chemical dynamics and that autonomous molecular systems can be designed via molecular programming languages.
Keyphrases
  • nucleic acid
  • single molecule
  • circulating tumor
  • cell free
  • primary care
  • healthcare
  • density functional theory
  • autism spectrum disorder
  • drug discovery
  • water soluble
  • perovskite solar cells