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De novo transcriptome assembly of the eight major organs of Sacha Inchi (Plukenetia volubilis) and the identification of genes involved in α-linolenic acid metabolism.

Xiao-Di HuBang-Zhen PanQiantang FuLongjian NiuMao-Sheng ChenZeng-Fu Xu
Published in: BMC genomics (2018)
The transcriptome of major organs of Sacha Inchi has been sequenced and de novo assembled, which will expand the genetic information for functional genomic studies of Sacha Inchi. In addition, the identification of candidate genes involved in ALA metabolism will provide useful resources for the genetic improvement of Sacha Inchi and the metabolic engineering of ALA biosynthesis in other plants.
Keyphrases
  • genome wide
  • copy number
  • rna seq
  • single cell
  • gene expression
  • dna methylation
  • bioinformatics analysis
  • case control
  • cell wall