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Mechanism of Asparagine-Mediated Proton Transfer in Photosynthetic Reaction Centers.

Yu SugoHiroshi Ishikita
Published in: Biochemistry (2023)
In photosynthetic reaction centers from purple bacteria (PbRCs), light-induced charge separation leads to the reduction of the terminal electron acceptor quinone, Q B . The reduction of Q B to Q B •- is followed by protonation via Asp-L213 and Ser-L223 in PbRC from Rhodobacter sphaeroides . However, Asp-L213 is replaced with nontitratable Asn-L222 and Asn-L213 in PbRCs from Thermochromatium tepidum and Blastochloris viridis , respectively. Here, we investigated the energetics of proton transfer along the asparagine-involved H-bond network using a quantum mechanical/molecular mechanical approach. The potential energy profile for the H-bond between H 3 O + and the carbonyl O site of Asn-L222 shows that the proton is predominantly localized at the Asn-L222 moiety in the T. tepidum PbRC protein environment, easily forming the enol species. The release of the proton from the amide -NH 2 site toward Ser-L232 via tautomerization suffers from the energy barrier. Upon reorientation of Asn-L222, the enol -OH site forms a short low-barrier H-bond with Ser-L232, facilitating protonation of Q B •- in a Grotthuss-like mechanism. This is a basis of how asparagine or glutamine side chains function as acceptors/donors in proton transfer pathways.
Keyphrases
  • electron transfer
  • solar cells
  • molecular dynamics
  • mass spectrometry
  • amino acid
  • single molecule
  • genetic diversity