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Genomic architecture of 5S rDNA cluster and its variations within and between species.

Qiutao DingRunsheng LiXiaoliang RenLu-Yan ChanVincy W S HoDongying XiePohao YeZhongying Zhao
Published in: BMC genomics (2022)
The results demonstrate that Nanopore DNA sequencing reads are capable of generating assembly of highly repetitive sequences, and rDNA units are highly dynamic both within and between population(s) of the same species in terms of sequence and copy number. The detailed structure and variation of the 5S rDNA units within the rDNA cluster pave the way for functional and evolutionary studies.
Keyphrases
  • copy number
  • mitochondrial dna
  • genome wide
  • single molecule
  • dna methylation
  • circulating tumor
  • single cell
  • gene expression
  • nucleic acid