Region of Interest analysis using mass spectrometry imaging of mitochondrial and sarcomeric proteins in acute cardiac infarction tissue.
Yuka YajimaTakuya HiratsukaYu KakimotoShuichiro OgawaKeisuke ShimaYuzo YamazakiKenichi YoshikawaKeiji TamakiTatsuaki TsuruyamaPublished in: Scientific reports (2018)
Matrix-assisted laser desorption ionization image mass spectrometry (MALDI-IMS) has been developed for the identification of peptides in various tissues. The MALDI-IMS signal distribution patterns and quantification of the signal intensities of the regions of interest (ROI) with healthy regions were compared for identification of the disease specific biomarkers. We performed a new ROI analysis using the conventional t-test and data number independent Cohen's d-value analysis. Using these techniques, we analysed heart tissues after acute myocardial infarction (AMI). As a result, IMS signals of mitochondrial adenosine triphosphate synthase alpha subunit (ATP5A), myosin-6/7(MYH6/7), aortic actin, and the myosin light chain 3 (MYL3) were identified in the infarcted region. In particular, the signals of MYH7 are significantly greater in the infarcted region using ROI analysis. ROI analysis using MALDI-IMS may be a promising technique for the identification of biomarkers for pathological studies that involve the comparison of diseased and control areas.
Keyphrases
- mass spectrometry
- acute myocardial infarction
- liquid chromatography
- hypertrophic cardiomyopathy
- left ventricular
- high resolution
- gas chromatography
- capillary electrophoresis
- high performance liquid chromatography
- bioinformatics analysis
- gene expression
- oxidative stress
- binding protein
- percutaneous coronary intervention
- liver failure
- pulmonary artery
- electronic health record
- tandem mass spectrometry
- protein kinase
- drug induced
- coronary artery
- coronary artery disease
- respiratory failure
- artificial intelligence
- simultaneous determination
- acute respiratory distress syndrome
- pulmonary arterial hypertension
- data analysis
- fluorescence imaging
- amino acid