Cell Cycle-Related Gene SPC24: A Novel Potential Diagnostic and Prognostic Biomarker for Laryngeal Squamous Cell Cancer.
Jialei ChenJing LuoJing HeXianyao JiangNing JiangChanghong YangShixun ZhongPublished in: BioMed research international (2023)
Laryngeal squamous cell cancer (LSCC) is a common malignant tumor with a high degree of malignancy, and its etiology remains unclear. Therefore, screening potential biomarkers is necessary to facilitate the treatment and diagnosis of LSCC. Robust rank aggregation (RRA) analysis was used to integrate two gene expression datasets of LSCC patients from the Gene Expression Omnibus (GEO) database and identify differentially expressed genes (DEGs) between LSCC and nonneoplastic tissues. A gene coexpression network was constructed using weighted gene correlation network analysis (WGCNA) to explore potential associations between the module genes and clinical features of LSCC. Combining differential gene expression analysis and survival analysis, we screened potential hub genes, including CDK1, SPC24, HOXB7, and SELENBP1. Subsequently, western blotting and immunohistochemistry were used to test the protein levels in clinical specimens to verify our findings. Finally, four candidate diagnostic and prognostic biomarkers (CDK1, SPC24, HOXB7, and SELENBP1) were identified. We propose, for the first time, that SPC24 is a gene that may associate with LSCC malignancy and is a novel therapeutic target. These findings may provide important mechanistic insight of LSCC.
Keyphrases
- squamous cell
- genome wide identification
- genome wide
- cell cycle
- network analysis
- gene expression
- dna methylation
- copy number
- genome wide analysis
- transcription factor
- bioinformatics analysis
- end stage renal disease
- cell proliferation
- magnetic resonance
- papillary thyroid
- emergency department
- squamous cell carcinoma
- ejection fraction
- climate change
- south africa
- human health
- peritoneal dialysis
- prognostic factors
- rna seq