SSRgenotyper: A simple sequence repeat genotyping application for whole-genome resequencing and reduced representational sequencing projects.

Daniel H LewisDavid E Jarvis Peter J Maughan

Published in: Applications in plant sciences (2020)

SSRgenotyper provides an easy-to-use, accurate, and scalable SSR genotyping platform for whole-genome resequencing data. SSRgenotyper is freely available at https://github.com/dlewis27/SSRgenotyper.

Keyphrases

high throughput
genetic diversity
genome wide
single cell
electronic health record
quality improvement
dna methylation
machine learning
amino acid
deep learning
mass spectrometry