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The archaeal highly thermostable GH35 family β-galactosidase DaβGal has a unique seven domain protein fold.

Yury V KilEvgeny B PichkurVladimir R SergeevYana A ZabrodskayaAlexander MyasnikovAndrey L KonevegaTatiana A ShtamValeriya R SamyginaGeorgy N Rychkov
Published in: The FEBS journal (2024)
The most extensively studied β-d-galactosidases (EC3.2.1.23) belonging to four glycoside hydrolase (GH) families 1, 2, 35, and 42 are widely distributed among Bacteria, Archaea and Eukaryotes. Here, we report a novel GH35 family β-galactosidase from the hyperthermophilic Thermoprotei archaeon Desulfurococcus amylolyticus (DaβGal). Unlike fungal monomeric six-domain β-galactosidases, the DaβGal enzyme is a dimer; it has an extra jelly roll domain D7 and three composite domains (D4, D5, and D6) that are formed by the distantly located polypeptide chain regions. The enzyme possesses a high specificity for β-d-galactopyranosides, and its distinguishing feature is the ability to cleave pNP-β-d-fucopyranoside. DaβGal efficiently catalyzes the hydrolysis of lactose at high temperatures, remains stable and active at 65 °С, and retains activity at 95 °С with a half-life time value equal to 73 min. These properties make archaeal DaβGal a more attractive candidate for biotechnology than the widely used fungal β-galactosidases.
Keyphrases
  • growth hormone
  • machine learning
  • deep learning
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  • neural network
  • small molecule
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  • protein protein
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  • anaerobic digestion
  • structural basis