FAIR data retrieval for sensitive clinical research data in Galaxy.

Jasper Ouwerkerk Helena Rasche J Dylan Spalding Saskia Hiltemann Andrew Peter Stubbs

Published in: GigaScience (2024)

We showed the feasibility of reusing data from the EGA in Galaxy via PyEGA3 and validated the workflow by rediscovering spiked-in variants in synthetic data. Finally, we improved existing tools in Galaxy and created a workflow for trio analysis to demonstrate the value of FAIR genomics analysis in Galaxy.

Keyphrases

electronic health record
big data
data analysis