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Quality of whole genome sequencing from blood versus saliva derived DNA in cardiac patients.

Roderick A YaoOyediran AkinrinadeMarie ChaixSeema Mital
Published in: BMC medical genomics (2020)
High quality saliva samples that meet stringent QC criteria can be used for WGS when blood-derived DNA is not available or is not suitable. Saliva DNA provides an acceptable yield of SNV calls but has a lower yield for CNV calls compared to blood DNA.
Keyphrases
  • circulating tumor
  • cell free
  • single molecule
  • end stage renal disease
  • ejection fraction
  • nucleic acid
  • chronic kidney disease
  • prognostic factors
  • circulating tumor cells
  • peritoneal dialysis
  • quality improvement