Deep learning links localized digital pathology phenotypes with transcriptional subtype and patient outcome in glioblastoma.
Thomas Roetzer-PejrimovskyKarl-Heinz NenningBarbara KieselJohanna KlughammerMartin RajchlBernhard BaumannGeorg LangsAdelheid WöhrerPublished in: GigaScience (2024)
We modify a well-known convolutional neural network architecture for glioblastoma digital slides to accurately map the spatial distribution of transcriptional subtypes and regions predictive of worse outcome, thereby showcasing the relevance of artificial intelligence-enabled image mining in brain cancer.
Keyphrases
- deep learning
- artificial intelligence
- convolutional neural network
- big data
- machine learning
- gene expression
- papillary thyroid
- transcription factor
- case report
- resting state
- heat shock
- white matter
- squamous cell
- squamous cell carcinoma
- functional connectivity
- brain injury
- lymph node metastasis
- oxidative stress
- subarachnoid hemorrhage