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Signal amplification method for miR-205 assay through combining graphene oxide with duplex-specific nuclease.

Zhaoqi YangLan QinDutao YangWeixia ChenYue QianJian Jin
Published in: RSC advances (2019)
Since microRNA-205 (miR-205) is a predictive biomarker for anti-radiation of nasopharyngeal carcinoma (NPC), quantitative detection of miR-205 is important for developing personalized strategies for the treatment of NPC. In this investigation, based on the graphene oxide sensor and duplex specific nuclease (DSN) for fluorescence signal amplification, a highly sensitive detection method for miR-205 was designed. A target-recycling mechanism is employed, where a single miR-205 target triggers the cleavage of many DNA signal probes. The method shows the ability to analyze miR-205 in solution, and it can detect miR-205 at concentrations as low as 132 pmol L -1 with a linear range of 5-40 nmol L -1 . Furthermore, the method is specific in that it distinguishes between a target miRNA and a sequence with single base, double base and three base mismatches, as well as other miRNAs. Considering simplicity and excellent sensitivity/specificity, it is promising for applications in radioresistance studies as well as the early clinical diagnosis of NPC.
Keyphrases
  • cell proliferation
  • long non coding rna
  • long noncoding rna
  • sensitive detection
  • single molecule
  • nucleic acid
  • dna binding
  • oxidative stress
  • cell free
  • dna damage response
  • label free
  • living cells