Probing chemotaxis activity in Escherichia coli using fluorescent protein fusions.
Clémence RoggoNicolas CarraroJan Roelof Van der MeerPublished in: Scientific reports (2019)
Bacterial chemotaxis signaling may be interesting for the development of rapid biosensor assays, but is difficult to quantify. Here we explore two potential fluorescent readouts of chemotactically active Escherichia coli cells. In the first, we probed interactions between the chemotaxis signaling proteins CheY and CheZ by fusing them individually with non-fluorescent parts of stable or unstable 'split'-Green Fluorescent Protein. Wild-type chemotactic cells but not mutants lacking the CheA kinase produced distinguishable fluorescence foci, two-thirds of which localize at the cell poles with the chemoreceptors and one-third at motor complexes. Fluorescent foci based on stable split-eGFP displayed small fluctuations in cells exposed to attractant or repellent, but those based on an unstable ASV-tagged eGFP showed a higher dynamic behaviour both in the foci intensity changes and the number of foci per cell. For the second readout, we expressed the pH-sensitive fluorophore pHluorin in the cyto- and periplasm of chemotactically active E. coli. Calibrations of pHluorin fluorescence as a function of pH demonstrated that cells accumulating near a chemo-attractant temporally increase cytoplasmic pH while decreasing periplasmic pH. Both readouts thus show promise for biosensor assays based on bacterial chemotaxis activity.
Keyphrases
- induced apoptosis
- escherichia coli
- quantum dots
- cell cycle arrest
- label free
- living cells
- endoplasmic reticulum stress
- single molecule
- single cell
- molecular dynamics simulations
- stem cells
- squamous cell carcinoma
- staphylococcus aureus
- wild type
- radiation therapy
- machine learning
- cell proliferation
- small molecule
- mesenchymal stem cells
- sensitive detection
- amino acid
- artificial intelligence
- binding protein
- energy transfer
- biofilm formation