A two-tier bioinformatic pipeline to develop probes for target capture of nuclear loci with applications in Melastomataceae.
Johanna R JantzenPrabha AmarasingheRyan A FolkMarcelo ReginatoFabian A MichelangeliDouglas E SoltisNico CellinesePamela S SoltisPublished in: Applications in plant sciences (2020)
Our pipeline successfully identified and targeted SCN loci in Memecylon and Tibouchina, enabling phylogenomic studies in both clades and potentially across Melastomataceae. This pipeline could be easily applied to other clades with few genomic resources.