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A Good check on the Bayes factor.

Nikola SekulovskiMaarten MarsmanEric-Jan Wagenmakers
Published in: Behavior research methods (2024)
Bayes factor hypothesis testing provides a powerful framework for assessing the evidence in favor of competing hypotheses. To obtain Bayes factors, statisticians often require advanced, non-standard tools, making it important to confirm that the methodology is computationally sound. This paper seeks to validate Bayes factor calculations by applying two theorems attributed to Alan Turing and Jack Good. The procedure entails simulating data sets under two hypotheses, calculating Bayes factors, and assessing whether their expected values align with theoretical expectations. We illustrate this method with an ANOVA example and a network psychometrics application, demonstrating its efficacy in detecting calculation errors and confirming the computational correctness of the Bayes factor results. This structured validation approach aims to provide researchers with a tool to enhance the credibility of Bayes factor hypothesis testing, fostering more robust and trustworthy scientific inferences.
Keyphrases
  • machine learning
  • electronic health record
  • molecular dynamics simulations
  • patient safety
  • molecular dynamics
  • adverse drug