cyjShiny: A cytoscape.js R Shiny Widget for network visualization and analysis.

Augustin LunaOmar ShahChris SanderPaul Shannon

Published in: PloS one (2023)

cyjShiny is an open-source R package that allows users to embed network visualization into Shiny apps and R Markdown documents. cyjShiny (https://github.com/cytoscape/cyjShiny) builds on the cytoscape.js Javascript graph library. Additionally, the package provides helper functions to convert common R data representations (e.g., data.frame) into forms compatible with cytoscape.js.

Keyphrases

electronic health record
working memory
regulatory t cells
dendritic cells
electron microscopy