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SVJedi-graph: improving the genotyping of close and overlapping structural variants with long reads using a variation graph.

Sandra RomainClaire Lemaitre
Published in: Bioinformatics (Oxford, England) (2023)
SVJedi-graph is distributed under an AGPL license and available on GitHub at https://github.com/SandraLouise/SVJedi-graph and as a BioConda package.
Keyphrases
  • neural network
  • convolutional neural network
  • high throughput
  • copy number
  • genome wide
  • deep learning
  • gene expression