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Selective 1H-1H Distance Restraints in Fully Protonated Proteins by Very Fast Magic-Angle Spinning Solid-State NMR.

Mukul G JainDaniela LalliJan StanekChandrakala GowdaSatya PrakashTom S SchwarzerTobias SchubeisKathrin CastiglioneLoren B AndreasP K MadhuGuido PintacudaVipin Agarwal
Published in: The journal of physical chemistry letters (2017)
Very fast magic-angle spinning (MAS > 80 kHz) NMR combined with high-field magnets has enabled the acquisition of proton-detected spectra in fully protonated solid samples with sufficient resolution and sensitivity. One of the primary challenges in structure determination of protein is observing long-range 1H-1H contacts. Here we use band-selective spin-lock pulses to obtain selective 1H-1H contacts (e.g., HN-HN) on the order of 5-6 Å in fully protonated proteins at 111 kHz MAS. This approach is a major advancement in structural characterization of proteins given that magnetization can be selectively transferred between protons that are 5-6 Å apart despite the presence of other protons at shorter distance. The observed contacts are similar to those previously observed only in perdeuterated proteins with selective protonation. Simulations and experiments show the proposed method has performance that is superior to that of the currently used methods. The method is demonstrated on GB1 and a β-barrel membrane protein, AlkL.
Keyphrases
  • solid state
  • high resolution
  • high frequency
  • magnetic resonance
  • density functional theory
  • molecular dynamics
  • room temperature
  • molecularly imprinted
  • binding protein
  • protein protein
  • amino acid
  • solid phase extraction