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Combining optical genome mapping and RNA-seq for structural variants detection and interpretation in unsolved neurodevelopmental disorders.

Bing XiaoXiaomei LuoYi LiuHui YeHuili LiuYanjie FanYong-Guo Yu
Published in: Genome medicine (2024)
SVs in ES-negative NDDs can be identified by OGM, which is particularly useful for SVs in non-coding regions not covered by ES. OGM helps to construct complex SVs and provides information on the location and orientation of duplications, which is crucial for pathogenicity interpretation. The integration of RNA-seq facilitates the interpretation of the functional consequences of SVs at the transcriptional level. These findings demonstrate the utility and feasibility of combining OGM and RNA-seq in ES-negative cases with NDDs.
Keyphrases
  • rna seq
  • single cell
  • high resolution
  • gene expression
  • copy number
  • transcription factor
  • genome wide
  • healthcare
  • high speed
  • dna methylation
  • real time pcr
  • cystic fibrosis
  • social media
  • quantum dots