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MiRAGE: mining relationships for advanced generative evaluation in drug repositioning.

Aria Hassanali AraghPegah GivehchianRazieh Moslemi AmiraniRaziyeh MasumshahChangiz Eslahchi
Published in: Briefings in bioinformatics (2024)
In response to this challenge, we present MiRAGE, a novel computational method for drug repositioning. MiRAGE leverages a three-step framework, comprising negative sampling using hard negative mining, classification employing random forest models, and feature selection based on feature importance. We evaluate MiRAGE on multiple benchmark datasets, demonstrating its superiority over state-of-the-art algorithms across various metrics. Notably, MiRAGE consistently outperforms other methods in uncovering novel DDAs. Case studies focusing on Parkinson's disease and schizophrenia showcase MiRAGE's ability to identify top candidate drugs supported by previous studies. Overall, our study underscores MiRAGE's efficacy and versatility as a computational tool for drug repositioning, offering valuable insights for therapeutic discoveries and addressing unmet medical needs.
Keyphrases
  • machine learning
  • deep learning
  • healthcare
  • bipolar disorder
  • adverse drug
  • emergency department
  • electronic health record
  • case control