Virtual Evolution of HVEM Segment for Checkpoint Inhibitor Discovery.
Mingjia YuHuimin ZhaoYuhui MiaoShi-Zhong LuoSong XuePublished in: International journal of molecular sciences (2021)
Immune therapy has emerged as an effective treatment against cancers. Inspired by the PD-1/PD-L1 antibodies, which have achieved great success in clinical, other immune checkpoint proteins have drawn increasing attention in cancer research. B and T lymphocyte attenuator (BTLA) and herpes virus entry mediator (HVEM) are potential targets for drug development. The co-crystal structure of BTLA/HVEM have revealed that HVEM (26-38) fragment is the core sequence which directly involved on the interface. Herein, we conducted virtual evolution with this sequence by using saturation mutagenesis in silico and mutants with lower binding energy were selected. Wet-lab experiments confirmed that several of them possessed higher affinity with BTLA. Based on the best mutant of the core sequence, extended peptides with better efficacy were obtained. Furthermore, the mechanism of the effects of mutations was revealed by computational analysis. The mutated peptide discovered here can be a potent inhibitor to block BTLA/HVEM interaction and its mechanism may extend people's view on inhibitor discovery for the checkpoint pair.
Keyphrases
- dna damage
- small molecule
- cell cycle
- amino acid
- wild type
- high throughput
- papillary thyroid
- working memory
- squamous cell carcinoma
- peripheral blood
- single cell
- molecular docking
- oxidative stress
- squamous cell
- transcription factor
- childhood cancer
- climate change
- replacement therapy
- molecular dynamics simulations
- capillary electrophoresis