PaintorPipe: a pipeline for genetic variant fine-mapping using functional annotations.

Zoé GerberMichel FisunHugues Aschard Sarah Djebali

Published in: Bioinformatics advances (2023)

PaintorPipe is implemented in the Nextflow pipeline specific language, can be run locally or on a slurm cluster and handles containerization using Singularity. PaintorPipe is freely available on GitHub (https://github.com/sdjebali/PaintorPipe).

Keyphrases

high resolution
air pollution
autism spectrum disorder
genome wide
high density
copy number
gene expression
mass spectrometry