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ProTstab - predictor for cellular protein stability.

Yang YangXuesong DingGuanchen ZhuAbhishek NiroulaQiang LvMauno Vihinen
Published in: BMC genomics (2019)
The Pearson's correlation coefficient was 0.793 in 10-fold cross validation and 0.763 in independent blind test. The corresponding values for mean absolute error are 0.024 and 0.036, respectively. Comparison with a previously published method indicated ProTstab to have superior performance. We used the method to predict stabilities of all the remaining proteins in the entire human proteome and then correlated the predicted stabilities to protein chain lengths of isoforms and to localizations of proteins.
Keyphrases
  • endothelial cells
  • protein protein
  • amino acid
  • binding protein
  • magnetic resonance imaging
  • systematic review
  • induced pluripotent stem cells