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Molecular phylogeny and taxonomy of the Hydrangeaserrata complex (Hydrangeaceae) in western Japan, including a new subspecies of H.acuminata from Yakushima.

Shun K HirotaTetsukazu YaharaKengo FuseHiroyuki SatoShuichiro TaganeShinji FujiiTadashi MinamitaniYoshihisa Suyama
Published in: PhytoKeys (2022)
According to the contemporary classification of Hydrangea native to Japan, H.serrata is a polymorphic species including six varieties. We discovered a plant identified as H.serrata , but morphologically distinct from previously known varieties, in Yakushima island where approximately 50 endemic species are known. To determine the relationship of this plant with previously known varieties, we examined morphology and constructed a highly resolved phylogeny of H.serrata and its relatives using three chloroplast genomic regions, rbc L, trn L intron, psb A- trn H, and two nuclear genomic regions, ITS1 and ITS2, and Multiplex ISSR genotyping by sequencing (MIG-seq). Based on these morphological and phylogenetic observations, we describe Hydrangeaacuminatasubsp.yakushimensis subsp. nov. as a newly discovered lineage in Yakushima, Japan and propose Hydrangeaminamitanii stat. nov. and Hydrangeaacuminatasubsp.australis stat. nov. which were previously treated as varieties of H.serrata .
Keyphrases
  • single cell
  • genome wide
  • high throughput
  • cell proliferation
  • copy number
  • genetic diversity
  • machine learning
  • rna seq
  • deep learning
  • gene expression
  • dna methylation
  • cell wall
  • single molecule