Active Surveillance of Antimicrobial Resistance and Carbapenemase-Encoding Genes According to Sites of Care and Age Groups in Mexico: Results from the INVIFAR Network.
Fabián Rojas-LariosBernardo Alfonso Martínez-GuerraLuis Esau Lopez JacomeEnrique Bolado-MartínezMaría Del Rosario Vázquez-LariosMaría Del Consuelo Velázquez-AcostaDaniel Romero-RomeroChristian Daniel Mireles-DávalosSandra Quintana-PonceJosé Manuel Feliciano-GuzmánJosé Miguel Pérez-HernandezYoselin Paola Correa-LeónEduardo López-GutiérrezEduardo Rodriguez-NoriegaEsteban González-DíazElena Victoria Choy-ChangJuan Pablo Mena-RamírezVíctor Antonio Monroy-ColinAlfredo Ponce de León-GarduñoMargarita Alcaraz-EspejelLaura Karina Avilés-BenítezLuís Javier Quintanilla-CazaresEloisa Ramírez-AlanísJuan Manuel Barajas-MagallónCecilia Padilla-IbarraMaria Bertha Ballesteros-SilvaNoe Antonio Atanacio-SixtoCecilia Teresita Morales-de-la-PeñaMario Galindo-MéndezTalía Pérez-VicelisGuillermo Jacobo-BacaMartha Irene Moreno-MéndezMaría de la Luz Mora-PachecoMaricruz Gutiérrez-BritoXochitl Yadira Sánchez-GodínezNorberta Vianey Navarro-VargasLuz Elena Mercado-BravoAlejandro Delgado-BarrientosMaría Asunción Santiago-CalderónIsmelda López-OvillaAlejandro Molina-ChavarriaJoaquín Rincón-ZunoRafael Franco CendejasSandra Miranda-MauricioIsabel Cristina Márquez-AvalosMaribel López-GarcíaLizbeth Soraya Duarte-MirandaCarlos Miguel Cetina-UmañaIrma Elena Barroso-Herrera-Y-CairoLaura Isabel López-MorenoElvira Garza-GonzálezPublished in: Pathogens (Basel, Switzerland) (2023)
We analyzed the antimicrobial resistance (AMR) data of 6519 clinical isolates of Escherichia coli ( n = 3985), Klebsiella pneumoniae ( n = 775), Acinetobacter baumannii ( n = 163), Pseudomonas aeruginosa ( n = 781), Enterococcus faecium ( n = 124), and Staphylococcus aureus ( n = 691) from 43 centers in Mexico. AMR assays were performed using commercial microdilution systems (37/43) and the disk diffusion susceptibility method (6/43). The presence of carbapenemase-encoding genes was assessed using PCR. Data from centers regarding site of care, patient age, and clinical specimen were collected. According to the site of care, the highest AMR was observed in E. coli , K. pneumoniae , and P. aeruginosa isolates from ICU patients. In contrast, in A. baumannii , higher AMR was observed in isolates from hospitalized non-ICU patients. According to age group, the highest AMR was observed in the ≥60 years age group for E. coli , E. faecium , and S. aureus , and in the 19-59 years age group for A. baumannii and P. aeruginosa . According to clinical specimen type, a higher AMR was observed in E. coli , K. pneumoniae , and P. aeruginosa isolates from blood specimens. The most frequently detected carbapenemase-encoding gene in E. coli was bla NDM (84%).
Keyphrases
- klebsiella pneumoniae
- escherichia coli
- antimicrobial resistance
- acinetobacter baumannii
- multidrug resistant
- pseudomonas aeruginosa
- end stage renal disease
- biofilm formation
- healthcare
- staphylococcus aureus
- drug resistant
- palliative care
- chronic kidney disease
- newly diagnosed
- intensive care unit
- ejection fraction
- genome wide
- gram negative
- prognostic factors
- quality improvement
- magnetic resonance
- genome wide identification
- electronic health record
- transcription factor
- pain management
- machine learning
- single cell
- candida albicans
- case report
- chronic pain
- mechanical ventilation
- artificial intelligence
- patient reported
- bioinformatics analysis
- respiratory tract
- extracorporeal membrane oxygenation