Mass Spectrometry-Based Technology and Workflows for Studying the Chemistry of Fungal Endophyte Derived Bioactive Compounds.
Priyamvada GuptaAshish VermaNilesh RaiAnurag Kumar SinghSantosh Kumar SinghBrijesh KumarRajiv KumarVibhav GautamPublished in: ACS chemical biology (2021)
Bioactive compounds have gained substantial attention in research and have conferred great advancements in the industrial and pharmacological fields. Highly diverse fungi and their metabolome serve as a big platform to be explored for their diverse bioactive compounds. Omics tools coupled with bioinformatics, statistical, and well-developed algorithm tools have elucidated immense knowledge about fungal endophyte derived bioactive compounds. Further, these compounds are subjected to chromatography-gas chromatography and liquid chromatography (LC), spectroscopy-nuclear magnetic resonance (NMR), and "soft ionization" technique-matrix-assisted laser desorption/ionization-time-of-flight (MALDI-TOF) based analytical techniques for structural characterization. The mass spectrometry (MS)-based approach, being highly sensitive, reproducible, and reliable, produces quick and high-profile identification. Coupling these techniques with MS has resulted in a descriptive account of the identification and quantification of fungal endophyte derived bioactive compounds. This paper emphasizes the workflows of the above-mentioned techniques, their advancement, and future directions to study the unraveled area of chemistry of fungal endophyte-derived bioactive compounds.
Keyphrases
- mass spectrometry
- liquid chromatography
- gas chromatography
- tandem mass spectrometry
- high resolution mass spectrometry
- magnetic resonance
- high resolution
- high performance liquid chromatography
- capillary electrophoresis
- simultaneous determination
- solid phase extraction
- gas chromatography mass spectrometry
- magnetic resonance imaging
- deep learning
- single cell
- high throughput
- wastewater treatment
- ms ms
- contrast enhanced
- bioinformatics analysis