Sensing site-specific structural characteristics and chirality using vibrational circular dichroism of isotope labeled peptides.
Timothy A KeiderlingPublished in: Chirality (2017)
Isotope labeling has a long history in chemistry as a tool for probing structure, offering enhanced sensitivity, or enabling site selection with a wide range of spectroscopic tools. Chirality sensitive methods such as electronic circular dichroism are global structural tools and have intrinsically low resolution. Consequently, they are generally insensitive to modifications to enhance site selectivity. The use of isotope labeling to modify vibrational spectra with unique resolvable frequency shifts can provide useful site-specific sensitivity, and these methods have been recently more widely expanded in biopolymer studies. While the spectral shifts resulting from changes in isotopic mass can provide resolution of modes from specific parts of the molecule and can allow detection of local change in structure with perturbation, these shifts alone do not directly indicate structure or chirality. With vibrational circular dichroism (VCD), the shifted bands and their resultant sign patterns can be used to indicate local conformations in labeled biopolymers, particularly if multiple labels are used and if their coupling is theoretically modeled. This mini-review discusses selected examples of the use of labeling specific amides in peptides to develop local structural insight with VCD spectra.
Keyphrases
- density functional theory
- molecular dynamics simulations
- single molecule
- molecular dynamics
- energy transfer
- molecular docking
- gas chromatography
- pet imaging
- computed tomography
- optical coherence tomography
- raman spectroscopy
- mass spectrometry
- drug discovery
- positron emission tomography
- high resolution
- label free
- ionic liquid