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T cell antigen discovery.

Alok V JoglekarGuideng Li
Published in: Nature methods (2020)
T cells respond to threats in an antigen-specific manner using T cell receptors (TCRs) that recognize short peptide antigens presented on major histocompatibility complex (MHC) proteins. The TCR-peptide-MHC interaction mediated between a T cell and its target cell dictates its function and thereby influences its role in disease. A lack of approaches for antigen discovery has limited the fundamental understanding of the antigenic landscape of the overall T cell response. Recent advances in high-throughput sequencing, mass cytometry, microfluidics and computational biology have led to a surge in approaches to address the challenge of T cell antigen discovery. Here, we summarize the scope of this challenge, discuss in depth the recent exciting work and highlight the outstanding questions and remaining technical hurdles in this field.
Keyphrases
  • small molecule
  • single cell
  • high throughput
  • high throughput sequencing
  • dendritic cells
  • cell therapy
  • regulatory t cells
  • optical coherence tomography
  • immune response
  • mesenchymal stem cells