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Leveraging multi-omics data to empower quantitative systems pharmacology in immuno-oncology.

Theinmozhi ArulrajHanwen WangAlberto IppolitoShuming ZhangElana J FertigAleksander S Popel
Published in: Briefings in bioinformatics (2024)
Understanding the intricate interactions of cancer cells with the tumor microenvironment (TME) is a pre-requisite for the optimization of immunotherapy. Mechanistic models such as quantitative systems pharmacology (QSP) provide insights into the TME dynamics and predict the efficacy of immunotherapy in virtual patient populations/digital twins but require vast amounts of multimodal data for parameterization. Large-scale datasets characterizing the TME are available due to recent advances in bioinformatics for multi-omics data. Here, we discuss the perspectives of leveraging omics-derived bioinformatics estimates to inform QSP models and circumvent the challenges of model calibration and validation in immuno-oncology.
Keyphrases
  • electronic health record
  • single cell
  • big data
  • palliative care
  • high resolution
  • rna seq
  • case report
  • artificial intelligence
  • deep learning
  • genetic diversity
  • gestational age