Unified metagenomic method for rapid detection of microorganisms in clinical samples.

Adela Alcolea-MedinaChristopher AlderLuke B SnellThemoula CharalampousAlp AydinGaia NebbiaTom WilliamsSimon GoldenbergSam DouthwaiteRahul BatraPenelope R Cliff Hannah Mischo Stuart J D NeilMark WilksJonathan D Edgeworth

Published in: Communications medicine (2024)

Although further workflow refinement and validation on samples containing a broader range of pathogens is required, it holds promise as a clinically deployable workflow suitable for evaluation in routine microbiology laboratories.

Keyphrases

electronic health record
clinical practice
gram negative
big data
antimicrobial resistance
antibiotic resistance genes
machine learning
multidrug resistant
artificial intelligence
microbial community
deep learning