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Sequencing, De Novo Assembly, and Annotation of the Complete Genome of a New Thraustochytrid Species, Strain CCAP_4062/3.

Khawla SeddikiFrançois GodartRiccardo Aiese CiglianoWalter SanseverinoMohamed BarakatPhilippe OrtetFabrice RébeilléEric MaréchalOlivier CagnacAlberto Amato
Published in: Genome announcements (2018)
Thraustochytrids are ecologically and biotechnologically relevant marine species. We report here the de novo assembly and annotation of the whole-genome sequence of a new thraustochytrid strain, CCAP_4062/3. The genome size was estimated at 38.7 Mb with 11,853 predicted coding sequences, and the GC content was scored at 57%.
Keyphrases
  • rna seq
  • genetic diversity
  • genome wide
  • single cell
  • dna methylation
  • gas chromatography
  • tandem mass spectrometry
  • liquid chromatography