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A New Pathway for the Preparation of Pyrano[2,3- c ]pyrazoles and molecular Docking as Inhibitors of p38 MAP Kinase.

Hai Truong NguyenMinh-Nhat Ha TruongTan Van LeNam Tri VoHoang Duc NguyenPhuong Hoang Tran
Published in: ACS omega (2022)
We report a new pathway to synthesize pyrano[2,3- c ]pyrazoles and their binding mode to p38 MAP kinase. Pyrano[2,3- c ]pyrazole derivatives have been prepared through a four-component reaction of benzyl alcohols, ethyl acetoacetate, phenylhydrazine, and malononitrile in the presence of sulfonated amorphous carbon and eosin Y as catalysts. All products were characterized by melting point, 1 H and 13 C NMR, and HRMS (ESI). The products were screened in silico for their binding activities to both the ATP-binding pocket and the lipid-binding pocket of p38 MAP kinase, using a structure-based flexible docking provided by the engine ADFR. The results showed that eight synthesized compounds had a higher affinity to the lipid pocket than to the other target site, which implied potential applications as allosteric inhibitors. Finally, the most biologically active compound, 5 , had a binding affinity comparable to those of other proven lipid pocket inhibitors, with affinity to the target pocket reaching -10.9932 kcal/mol, and also had the best binding affinity to the ATP-binding pockets in all of our products. Thus, our research provides a novel pathway for synthesizing pyrano[2,3- c ]pyrazoles and bioinformatic evidence for their biological capability to block p38 MAP kinase pockets, which could be useful for developing cancer or immune drugs.
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