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Genome sequence, antibiotic resistance genes, and plasmids in a monophasic variant of Salmonella typhimurium isolated from retail pork.

Anahita Ghorbani TajaniAniket SharmaNicolas BlouinBledar Bisha
Published in: Microbiology resource announcements (2024)
A Salmonella isolate from retail pork was whole genome sequenced using Illumina NovaSeq6000, with a 5,320,119 bp genome and 51.06% GC content. Several antibiotic resistance genes and plasmids, including bla TEM-1 , aac(6')-IIc , IncHI2, and p0111 were obtained from subsequent analysis. These findings provide vital insights into generic determinants of antimicrobial resistance (AMR) in this foodborne pathogen.
Keyphrases
  • antibiotic resistance genes
  • antimicrobial resistance
  • escherichia coli
  • listeria monocytogenes
  • klebsiella pneumoniae
  • wastewater treatment
  • microbial community
  • anaerobic digestion
  • genome wide
  • candida albicans