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Benchmark dose modeling of transcriptional data: a systematic approach to identify best practices for study designs used in radiation research.

Robert StainforthNgoc VuongNadine AdamByron KuoRuth C WilkinsCarole YaukAfshin BeheshtiVinita Chauhan
Published in: International journal of radiation biology (2022)
Successful application of transcriptomic BMD modeling for radiation datasets requires considerations of the exposure dose and the number of biological replicates. Most important is the selection of the lowest doses and dose spacing. Reflections on these parameters in experimental design will provide meaningful BMD outputs that could correlate well to apical endpoints of relevance to radiation exposure assessment.
Keyphrases
  • healthcare
  • primary care
  • gene expression
  • electronic health record
  • radiation therapy
  • machine learning
  • oxidative stress
  • heat shock