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Biocatalytic synthesis of non-standard amino acids by a decarboxylative aldol reaction.

Jonathan M EllisMeghan E CampbellPrasanth KumarEric P GeunesCraig A BingmanAndrew R Buller
Published in: Nature catalysis (2022)
Enzymes are renowned for their catalytic efficiency and selectivity. Despite the wealth of carbon-carbon bond forming transformations in traditional organic chemistry and nature, relatively few C-C bond forming enzymes have found their way into the biocatalysis toolbox. Here we show that the enzyme UstD performs a highly selective decarboxylative aldol addition with diverse aldehyde substrates to make non-standard, γ-hydroxy amino acids. We increased the activity of UstD through three rounds of classic directed evolution and an additional round of computationally-guided engineering. The enzyme that emerged, UstD v2.0 , is efficient in a whole-cell biocatalysis format. The products are highly desirable, functionally rich bioactive γ-hydroxy amino acids that we demonstrate can be prepared stereoselectively on gram-scale. The X-ray crystal structure of UstD v2.0 at 2.25 Å reveals the active site and provides a foundation for probing the mechanism of UstD.
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