Machine-Learning-Aided Quantification of Area Coverage of Adherent Cells from Phase-Contrast Images.
Gal RosoffShir ElkabetzLevi A GheberPublished in: Microscopy and microanalysis : the official journal of Microscopy Society of America, Microbeam Analysis Society, Microscopical Society of Canada (2022)
The advances in machine learning (ML) software availability, efficiency, and friendliness, combined with the increase in the computation power of personal computers, are harnessed to rapidly and (relatively) effortlessly analyze time-lapse image series of adherent cell cultures, taken with phase-contrast microscopy (PCM). Since PCM is arguably the most widely used technique to visualize adherent cells in a label-free, noninvasive, and nondisruptive manner, the ability to easily extract quantitative information on the area covered by cells, should provide a valuable tool for investigation. We demonstrate two cases, in one we monitor the shrinking of cells in response to a toxicant, and in the second we measure the proliferation curve of mesenchymal stem cells (MSCs).
Keyphrases
- induced apoptosis
- machine learning
- mesenchymal stem cells
- cell cycle arrest
- label free
- deep learning
- magnetic resonance
- endoplasmic reticulum stress
- signaling pathway
- oxidative stress
- high resolution
- stem cells
- healthcare
- cell death
- artificial intelligence
- magnetic resonance imaging
- high throughput
- social media
- data analysis
- affordable care act