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TrackMate 7: integrating state-of-the-art segmentation algorithms into tracking pipelines.

Dmitry ErshovMinh-Son PhanJoanna W PylvänäinenStéphane U RigaudLaure Le BlancArthur Charles-OrszagJames R W ConwayRomain F LaineNathan H RoyDaria BonazziGuillaume DuménilGuillaume JacquemetJean-Yves Tinevez
Published in: Nature methods (2022)
TrackMate is an automated tracking software used to analyze bioimages and is distributed as a Fiji plugin. Here, we introduce a new version of TrackMate. TrackMate 7 is built to address the broad spectrum of modern challenges researchers face by integrating state-of-the-art segmentation algorithms into tracking pipelines. We illustrate qualitatively and quantitatively that these new capabilities function effectively across a wide range of bio-imaging experiments.
Keyphrases
  • deep learning
  • machine learning
  • convolutional neural network
  • high resolution
  • psychometric properties