π-π-Induced aggregation and single-crystal fluorescence anisotropy of 5,6,10b-tri-aza-acephenanthrylene.
Katarzyna OstrowskaDavide CeresoliKatarzyna Marta StadnickaMarlena GrylMarco CazzanigaRaffaella SoaveBogdan MusielakŁukasz J WitekPiotr GoszczyckiJarosław GrolikAndrzej M TurekPublished in: IUCrJ (2018)
The structural origin of absorption and fluorescence anisotropy of the single crystal of the π-conjugated heterocyclic system 5,6,10b-tri-aza-acephenan-thrylene, TAAP, is presented in this study. X-ray analysis shows that the crystal framework in the space group P [Formula: see text] is formed by centrosymmetric dimers of face-to-face mutually oriented TAAP molecules joined by π-π non-covalent interactions. The conformation of the TAAP molecule is stabilized by intramolecular C-H⋯N(sp2), N(sp2)H⋯π(CN), and C-H⋯O(sp2) hydrogen bonds. The presence of weak π-π interactions is confirmed by quantum theory of atoms in molecules (QTAIM) and non-covalent interaction (NCI) analysis. The analysis of the optical spectra of TAAP in solution and in the solid state does not allow the specification of the aggregation type. DFT calculations for the dimer in the gas phase indicate that the lowest singlet excitation is forbidden by symmetry, suggesting H-type aggregation, even though the overall absorption spectrum is bathochromically shifted as for the J-type. The experimental determination of the permanent dipole moment of a TAAP molecule in 1,4-dioxane solution indicates the presence of the monomer form. The calculated absorption and emission spectra of the crystal in a simple approximation are consistent with the experimentally determined orientation of the absorption and emission transition dipole moments in TAAP single crystals. The electrostatic interaction between monomers with a permanent dipole moment (ca 4 D each) could result in the unusual spectroscopic JH-aggregate behaviour of the TAAP dimer.
Keyphrases
- solid state
- energy transfer
- density functional theory
- molecular dynamics simulations
- molecular dynamics
- high resolution
- molecular docking
- single molecule
- molecularly imprinted
- mass spectrometry
- computed tomography
- magnetic resonance imaging
- magnetic resonance
- lymph node metastasis
- smoking cessation
- protein kinase
- oxidative stress
- endothelial cells
- solid phase extraction
- monte carlo
- simultaneous determination