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riboCIRC: a comprehensive database of translatable circRNAs.

Huihui LiMingzhe XieYan WangLudong YangZhi XieHongwei Wang
Published in: Genome biology (2021)
riboCIRC is a translatome data-oriented circRNA database specifically designed for hosting, exploring, analyzing, and visualizing translatable circRNAs from multi-species. The database provides a comprehensive repository of computationally predicted ribosome-associated circRNAs; a manually curated collection of experimentally verified translated circRNAs; an evaluation of cross-species conservation of translatable circRNAs; a systematic de novo annotation of putative circRNA-encoded peptides, including sequence, structure, and function; and a genome browser to visualize the context-specific occupant footprints of circRNAs. It represents a valuable resource for the circRNA research community and is publicly available at http://www.ribocirc.com .
Keyphrases
  • healthcare
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  • amino acid
  • big data
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  • rna seq
  • deep learning
  • drug induced