Can Persistent Homology Features Capture More Intrinsic Information about Tumors from 18 F-Fluorodeoxyglucose Positron Emission Tomography/Computed Tomography Images of Head and Neck Cancer Patients?
Quoc Cuong LeHidetaka ArimuraKenta NinomiyaTakumi KodamaTetsuhiro MoriyamaPublished in: Metabolites (2022)
This study hypothesized that persistent homology (PH) features could capture more intrinsic information about the metabolism and morphology of tumors from 18 F-fluorodeoxyglucose positron emission tomography (PET)/computed tomography (CT) images of patients with head and neck (HN) cancer than other conventional features. PET/CT images and clinical variables of 207 patients were selected from the publicly available dataset of the Cancer Imaging Archive. PH images were generated from persistent diagrams obtained from PET/CT images. The PH features were derived from the PH PET/CT images. The signatures were constructed in a training cohort from features from CT, PET, PH-CT, and PH-PET images; clinical variables; and the combination of features and clinical variables. Signatures were evaluated using statistically significant differences ( p -value, log-rank test) between survival curves for low- and high-risk groups and the C-index. In an independent test cohort, the signature consisting of PH-PET features and clinical variables exhibited the lowest log-rank p -value of 3.30 × 10 -5 and C-index of 0.80, compared with log-rank p -values from 3.52 × 10 -2 to 1.15 × 10 -4 and C-indices from 0.34 to 0.79 for other signatures. This result suggests that PH features can capture the intrinsic information of tumors and predict prognosis in patients with HN cancer.
Keyphrases
- positron emission tomography
- pet ct
- computed tomography
- deep learning
- convolutional neural network
- pet imaging
- optical coherence tomography
- dual energy
- image quality
- papillary thyroid
- magnetic resonance imaging
- newly diagnosed
- ejection fraction
- contrast enhanced
- high resolution
- dna methylation
- healthcare
- magnetic resonance
- genome wide
- prognostic factors
- wastewater treatment
- chronic kidney disease
- machine learning
- photodynamic therapy
- patient reported