RNA secondary structure profiling in zebrafish reveals unique regulatory features.

Kriti KaushikAmbily SivadasShamsudheen Karuthedath VellarikkalAnkit VermaRijith JayarajanSatyaprakash PandeyTavprithesh SethiSouvik MaitiVinod ScariaSridhar Sivasubbu

Published in: BMC genomics (2018)

Our study presents the first PARS-enabled transcriptome-wide secondary structure map of zebrafish, which documents pairing probability of RNA at single nucleotide precision. Our findings open avenues for exploring structural features in zebrafish RNAs and their influence on gene expression.

Keyphrases

gene expression
single cell
dna methylation
minimally invasive
transcription factor
genome wide
nucleic acid
high density