Setu: a pipeline for the robust assembly of SARS-CoV-2 genomes.

Nityendra ShuklaNeha SrivastavaPrachi Srivastava Jitendra Narayan

Published in: Microbiology resource announcements (2024)

Setu is an efficient pipeline integrating currently available open source bioinformatic tools to perform rapid de novo assembly to assist tracking of severe acute respiratory syndrome coronavirus 2 genome evolution in clinical data, being particularly useful for institutions with limited computing resources or personnel not familiar with bioinformatic pipelines.

Keyphrases

respiratory syndrome coronavirus
sars cov
coronavirus disease
electronic health record
big data
machine learning
gene expression
data analysis
artificial intelligence
quantum dots